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New PyTorch library fastrad achieves 25× speedup over PyRadiomics for medical imaging feature extraction while maintaining 100% IBSI compliance.

r/MachineLearningMar 31, 20261 min read
New PyTorch library fastrad achieves 25× speedup over PyRadiomics for medical imaging feature extraction while maintaining 100% IBSI compliance.

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3 Key Points

  1. fastrad processes radiomics scans in 0.116 seconds on RTX 4070 Ti compared to 2.90 seconds with CPU-based PyRadiomics

  2. Implements all 8 IBSI feature classes (first-order, shape 2D/3D, GLCM, GLRLM, GLSZM, GLDM, NGTDM) as native GPU tensor operations

  3. Validated against IBSI Phase 1 digital phantom with maximum deviation of 10⁻¹³% across 105 features

  4. Outperforms PyRadiomics even on single-thread CPU by 2.63× on x86 and 3.56× on Apple Silicon, using only 654 MB peak VRAM

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