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Astellas adopts Boltz-2 NIM to speed up drug discovery

Astellas adopts Boltz-2 NIM to speed up drug discovery

Key takeaway

  • Astellas has adopted NVIDIA's Boltz-2 NIM to speed up drug discovery.

  • In one project, it cut assays by over 90% and timelines by over 70%.

  • The tool is now used by over 50 regular users across the company.

3 Key Points

  1. What happened

    Astellas Pharma has adopted NVIDIA's Boltz-2 NIM, an AI-powered platform that predicts biomolecular structures and binding affinity, to democratize and accelerate its drug discovery workflows.

  2. Why it matters

    In a membrane-protein-targeted project, AI prioritization cut the number of compounds needing experimental evaluation to just 10, reducing assay count by over 90% and shortening the timeline to hit identification by over 70%. All 10 selected compounds showed the desired efficacy, validating the approach.

  3. What to watch

    The tool is already in company-wide use, with over 50 regular users and over 2,000 cumulative uses as of end of February 2026. Astellas plans to expand NIM deployment on Tokyo-1 with additional models like DiffDock, GenMol, and MolMIM for further democratization.

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Context & Analysis

Astellas Pharma had identified a bottleneck in drug discovery: computational chemists had to evaluate large numbers of compounds, slowing down the process. To address this, they integrated Boltz-2 NIM, an AI model that predicts both protein structure and compound binding affinity, into their workflow. The tool, optimized for NVIDIA GPUs, allowed medicinal chemists to run simple simulations themselves, reducing reliance on computational chemists for routine tasks. The company also developed a browser-based frontend and an application that converts structural formulas into SMILE notation, enhancing usability. Results were dramatic: in one project, the number of compounds for assay was cut to 10, reducing assay count by over 90% and time by over 70%, with all 10 hits confirmed. As of February 2026, the application had over 50 regular users and over 2,000 cumulative uses. Astellas plans to expand NIM deployment with additional models for other modalities, aiming to further democratize AI-driven drug discovery.

FAQ

How much faster is Boltz-2 NIM compared to the open-source version?
For a target, Boltz-2 NIM ran in 7 seconds, while the Python-based open-source Boltz-2 took over 20 seconds, making it about 3 times faster.
What is the Tokyo-1 project?
Tokyo-1 is an innovation hub for the Japanese healthcare industry, launched by Zeureka (a Mitsui & Co. subsidiary), which Astellas participates in and uses as the computing platform for drug discovery.
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